Analysis of Ligand-Protein Contacts in PDB entry:
1KDO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 1KDO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
501 5SULFATE ION
lig 2
SO4
A
502 5SULFATE ION
lig 3
SO4
A
503 5SULFATE ION
lig 4
C5P
A
5407 21CYTIDINE-5'-MONOPHOSPHATE
lig 5
SO4
B
601 5SULFATE ION
lig 6
SO4
B
602 5SULFATE ION
lig 7
C5P
B
6407 21CYTIDINE-5'-MONOPHOSPHATE