Analysis of Ligand-Protein Contacts in PDB entry:
1LQV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 40 ligands in PDB entry 1LQV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CGU
C
6 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 2
CGU
C
7 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 3
CGU
C
14 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 4
CGU
C
16 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 5
CGU
C
19 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 6
CGU
C
20 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 7
CGU
C
25 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 8
CGU
C
26 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 9
CGU
C
29 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 10
CGU
D
6 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 11
CGU
D
7 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 12
CGU
D
14 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 13
CGU
D
16 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 14
CGU
D
19 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 15
CGU
D
20 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 16
CGU
D
25 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 17
CGU
D
26 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 18
CGU
D
29 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 19
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
A
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
PTY
A
606 50PHOSPHATIDYLETHANOLAMINE
lig 23
NAG
B
600 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
B
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
B
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
PTY
B
607 50PHOSPHATIDYLETHANOLAMINE
lig 27
CA
C
34 1CALCIUM ION
lig 28
CA
C
35 1CALCIUM ION
lig 29
CA
C
36 1CALCIUM ION
lig 30
CA
C
42 1CALCIUM ION
lig 31
CA
C
43 1CALCIUM ION
lig 32
CA
C
45 1CALCIUM ION
lig 33
CA
C
46 1CALCIUM ION
lig 34
CA
D
37 1CALCIUM ION
lig 35
CA
D
38 1CALCIUM ION
lig 36
CA
D
39 1CALCIUM ION
lig 37
CA
D
40 1CALCIUM ION
lig 38
CA
D
41 1CALCIUM ION
lig 39
CA
D
44 1CALCIUM ION
lig 40
CA
D
47 1CALCIUM ION