Analysis of Ligand-Protein Contacts in PDB entry:
1MFU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 1MFU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
GLC
B
1 11ALPHA-D-GLUCOPYRANOSE
lig 3
AGL
B
2 104-AMINO-4,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSE
lig 4
GLC
C
1 12ALPHA-D-GLUCOPYRANOSE
lig 5
GLC
C
2 11ALPHA-D-GLUCOPYRANOSE
lig 6
AGL
C
3 104-AMINO-4,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSE
lig 7
GLC
D
1 12ALPHA-D-GLUCOPYRANOSE
lig 8
GLC
D
2 11ALPHA-D-GLUCOPYRANOSE
lig 9
AGL
D
3 104-AMINO-4,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSE
lig 10
GLC
E
1 11ALPHA-D-GLUCOPYRANOSE
lig 11
GLC
E
2 11ALPHA-D-GLUCOPYRANOSE
lig 12
GLC
F
1 12ALPHA-D-GLUCOPYRANOSE
lig 13
GLC
F
2 11ALPHA-D-GLUCOPYRANOSE
lig 14
AGL
F
3 104-AMINO-4,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSE
lig 15
HMC
A
498 115-HYDROXYMETHYL-CHONDURITOL
lig 16
HMC
A
501 115-HYDROXYMETHYL-CHONDURITOL
lig 17
HMC
A
549 115-HYDROXYMETHYL-CHONDURITOL
lig 18
HMC
A
599 115-HYDROXYMETHYL-CHONDURITOL
lig 19
GLC
A
625 11ALPHA-D-GLUCOPYRANOSE
lig 20
CA
A
492 1CALCIUM ION
lig 21
CL
A
493 1CHLORIDE ION