Analysis of Ligand-Protein Contacts in PDB entry:
1NEK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1NEK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OAA
A
589 9OXALOACETATE ION
lig 2
CA
A
590 1CALCIUM ION
lig 3
FAD
A
601 53FLAVIN-ADENINE DINUCLEOTIDE
lig 4
CA
B
311 1CALCIUM ION
lig 5
FES
B
302 4FE2/S2 (INORGANIC) CLUSTER
lig 6
SF4
B
303 8IRON/SULFUR CLUSTER
lig 7
F3S
B
304 7FE3-S4 CLUSTER
lig 8
HEM
C
305 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
CDN
C
308 77CARDIOLIPIN
lig 10
EPH
C
309 35 PHOSPHATIDYLETHANOLAMINE
lig 11
UQ2
D
306 23UBIQUINONE-2