Analysis of Ligand-Protein Contacts in PDB entry:
1NQ9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 1NQ9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
Z9L
D
1 25METHYL 2,3,6-TRI-O-SULFO-ALPHA-D-GLUCOPYRA
lig 8
Z9K
D
2 173-O-METHYL-2-O-SULFO-ALPHA-L-IDOPYRANURONI
lig 9
GU6
D
3 232,3,6-TRI-O-SULFO-ALPHA-D-GLUCOPYRANOSE
lig 10
GU1
D
4 142,3-DI-O-METHYL-BETA-D-GLUCOPYRANURONIC AC
lig 11
Z9H
D
5 213,4-DI-O-METHYL-2,6-DI-O-SULFO-ALPHA-D-GLU
lig 12
Z9L
E
1 25METHYL 2,3,6-TRI-O-SULFO-ALPHA-D-GLUCOPYRA
lig 13
Z9K
E
2 173-O-METHYL-2-O-SULFO-ALPHA-L-IDOPYRANURONI
lig 14
GU6
E
3 232,3,6-TRI-O-SULFO-ALPHA-D-GLUCOPYRANOSE
lig 15
GU1
E
4 142,3-DI-O-METHYL-BETA-D-GLUCOPYRANURONIC AC
lig 16
Z9H
E
5 213,4-DI-O-METHYL-2,6-DI-O-SULFO-ALPHA-D-GLU
lig 17
NAG
I
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
L
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE