Analysis of Ligand-Protein Contacts in PDB entry:
1P16


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 10 ligands in PDB entry 1P16. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
C
105 10PHOSPHOSERINE
lig 2
SEP
C
112 10PHOSPHOSERINE
lig 3
SEP
D
105 10PHOSPHOSERINE
lig 4
SEP
D
112 10PHOSPHOSERINE
lig 5
SEP
D
119 10PHOSPHOSERINE
lig 6
PO4
A
7001 5PHOSPHATE ION
lig 7
PO4
A
7002 5PHOSPHATE ION
lig 8
PO4
A
7005 5PHOSPHATE ION
lig 9
5GP
A
1167 23GUANOSINE-5'-MONOPHOSPHATE
lig 10
GTP
B
5001 32GUANOSINE-5'-TRIPHOSPHATE