Analysis of Ligand-Protein Contacts in PDB entry:
1PDT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 1PDT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GPN
B
9 212-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-GUAN
lig 2
CPN
B
10 182-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-CYTO
lig 3
TPN
B
11 192-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-THYM
lig 4
APN
B
12 202-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-ADEN
lig 5
TPN
B
13 192-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-THYM
lig 6
GPN
B
14 212-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-GUAN
lig 7
TPN
B
15 192-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-THYM
lig 8
CPN
B
16 182-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-CYTO
lig 9
NH2
B
17 1AMINO GROUP