Analysis of Ligand-Protein Contacts in PDB entry:
1PJ3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 1PJ3. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MN
A
604 1MANGANESE (II) ION
lig 2
PYR
A
603 6PYRUVIC ACID
lig 3
NAD
A
601 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 4
NAD
A
602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 5
FUM
A
700 8FUMARIC ACID
lig 6
MN
B
1604 1MANGANESE (II) ION
lig 7
PYR
B
1603 6PYRUVIC ACID
lig 8
NAD
B
1601 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 9
NAD
B
1602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 10
FUM
B
1700 8FUMARIC ACID
lig 11
MN
C
2604 1MANGANESE (II) ION
lig 12
PYR
C
2603 6PYRUVIC ACID
lig 13
NAD
C
2601 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 14
NAD
C
2602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 15
FUM
C
2700 8FUMARIC ACID
lig 16
MN
D
3604 1MANGANESE (II) ION
lig 17
PYR
D
3603 6PYRUVIC ACID
lig 18
NAD
D
3601 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 19
NAD
D
3602 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 20
FUM
D
3700 8FUMARIC ACID