Analysis of Ligand-Protein Contacts in PDB entry:
1PKK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 1PKK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
A
294 41,2-ETHANEDIOL
lig 2
EDO
A
296 41,2-ETHANEDIOL
lig 3
EDO
A
298 41,2-ETHANEDIOL
lig 4
DCP
B
293 282'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
lig 5
EDO
B
295 41,2-ETHANEDIOL
lig 6
EDO
B
297 41,2-ETHANEDIOL
lig 7
EDO
B
299 41,2-ETHANEDIOL
lig 8
EDO
B
300 41,2-ETHANEDIOL