Analysis of Ligand-Protein Contacts in PDB entry:
1PP9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 41 ligands in PDB entry 1PP9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
JZR
A
4002 18HEXYL BETA-D-GLUCOPYRANOSIDE
lig 2
AZI
A
4005 3AZIDE ION
lig 3
PEE
A
4003 61,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 4
PO4
B
3010 5PHOSPHATE ION
lig 5
GOL
B
2013 6GLYCEROL
lig 6
JZR
C
2008 18HEXYL BETA-D-GLUCOPYRANOSIDE
lig 7
AZI
C
2014 3AZIDE ION
lig 8
HEM
C
501 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
HEM
C
502 43PROTOPORPHYRIN IX CONTAINING FE
lig 10
SMA
C
2001 37STIGMATELLIN A
lig 11
UQ
C
2002 14COENZYME Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-
lig 12
PEE
C
2007 491,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 13
PEE
C
2012 51,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 14
GOL
C
2009 6GLYCEROL
lig 15
AZI
D
4004 3AZIDE ION
lig 16
HEC
D
501 43HEME C
lig 17
PEE
D
2006 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 18
FES
E
501 4FE2/S2 (INORGANIC) CLUSTER
lig 19
JZR
F
3011 18HEXYL BETA-D-GLUCOPYRANOSIDE
lig 20
JZR
F
4001 18HEXYL BETA-D-GLUCOPYRANOSIDE
lig 21
CDL
G
2003 50CARDIOLIPIN
lig 22
CDL
G
2004 44CARDIOLIPIN
lig 23
PEE
G
2005 491,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 24
PEE
N
3012 51,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 25
PO4
O
2010 5PHOSPHATE ION
lig 26
GOL
O
3013 6GLYCEROL
lig 27
JZR
P
3008 18HEXYL BETA-D-GLUCOPYRANOSIDE
lig 28
AZI
P
3014 3AZIDE ION
lig 29
HEM
P
501 43PROTOPORPHYRIN IX CONTAINING FE
lig 30
HEM
P
502 43PROTOPORPHYRIN IX CONTAINING FE
lig 31
SMA
P
3001 37STIGMATELLIN A
lig 32
UQ
P
3002 14COENZYME Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-
lig 33
PEE
P
3007 491,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 34
GOL
P
3009 6GLYCEROL
lig 35
HEC
Q
501 43HEME C
lig 36
CDL
Q
3003 50CARDIOLIPIN
lig 37
PEE
Q
3006 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 38
FES
R
501 4FE2/S2 (INORGANIC) CLUSTER
lig 39
JZR
S
2011 18HEXYL BETA-D-GLUCOPYRANOSIDE
lig 40
CDL
T
3004 49CARDIOLIPIN
lig 41
PEE
T
3005 491,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM