Analysis of Ligand-Protein Contacts in PDB entry:
1Q84


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 5 ligands in PDB entry 1Q84. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
A
1501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
1701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
P6G
A
901 19HEXAETHYLENE GLYCOL
lig 4
TZ4
A
951 50 PHENANTHRIDINIUM
lig 5
TZ4
B
952 50 PHENANTHRIDINIUM