Analysis of Ligand-Protein Contacts in PDB entry:
1QDC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 1QDC. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MMA
E
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 2
MAN
E
2 11ALPHA-D-MANNOPYRANOSE
lig 3
MMA
F
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 4
MAN
F
2 11ALPHA-D-MANNOPYRANOSE
lig 5
MMA
G
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 6
MAN
G
2 11ALPHA-D-MANNOPYRANOSE
lig 7
MMA
H
1 13METHYL ALPHA-D-MANNOPYRANOSIDE
lig 8
MAN
H
2 11ALPHA-D-MANNOPYRANOSE
lig 9
MN
A
240 1MANGANESE (II) ION
lig 10
CA
A
241 1CALCIUM ION
lig 11
CL
A
242 1CHLORIDE ION
lig 12
MN
B
243 1MANGANESE (II) ION
lig 13
CA
B
244 1CALCIUM ION
lig 14
MN
C
245 1MANGANESE (II) ION
lig 15
CA
C
246 1CALCIUM ION
lig 16
MN
D
247 1MANGANESE (II) ION
lig 17
CA
D
248 1CALCIUM ION