Analysis of Ligand-Protein Contacts in PDB entry:
1QOT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 1QOT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GAL
E
1 12BETA-D-GALACTOPYRANOSE
lig 2
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 3
GAL
F
1 12BETA-D-GALACTOPYRANOSE
lig 4
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 5
GLC
G
1 12ALPHA-D-GLUCOPYRANOSE
lig 6
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 7
FUC
G
3 10ALPHA-L-FUCOPYRANOSE
lig 8
GAL
H
1 12BETA-D-GALACTOPYRANOSE
lig 9
FUC
H
2 10ALPHA-L-FUCOPYRANOSE
lig 10
MN
A
301 1MANGANESE (II) ION
lig 11
CA
A
302 1CALCIUM ION
lig 12
NAG
A
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
MN
B
303 1MANGANESE (II) ION
lig 14
CA
B
304 1CALCIUM ION
lig 15
NAG
B
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
MN
C
305 1MANGANESE (II) ION
lig 17
CA
C
306 1CALCIUM ION
lig 18
NAG
C
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
MN
D
307 1MANGANESE (II) ION
lig 20
CA
D
308 1CALCIUM ION
lig 21
NAG
D
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE