Analysis of Ligand-Protein Contacts in PDB entry:
1RDI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 1RDI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MFU
1
1 12METHYL ALPHA-L-FUCOPYRANOSIDE
lig 2
CA
1
227 1CALCIUM ION
lig 3
CA
1
2 1CALCIUM ION
lig 4
CL
1
3 1CHLORIDE ION
lig 5
MFU
2
1 12METHYL ALPHA-L-FUCOPYRANOSIDE
lig 6
CA
2
227 1CALCIUM ION
lig 7
CA
2
2 1CALCIUM ION