Analysis of Ligand-Protein Contacts in PDB entry:
1SMH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 9 ligands in PDB entry 1SMH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
197 11PHOSPHOTHREONINE
lig 2
SEP
A
338 10PHOSPHOSERINE
lig 3
BU3
A
901 6(R,R)-2,3-BUTANEDIOL
lig 4
BU3
A
903 6(R,R)-2,3-BUTANEDIOL
lig 5
BU3
A
904 6(R,R)-2,3-BUTANEDIOL
lig 6
BU3
A
905 6(R,R)-2,3-BUTANEDIOL
lig 7
BU3
A
906 6(R,R)-2,3-BUTANEDIOL
lig 8
MG8
A
1000 10N-OCTANOYL-N-METHYLGLUCAMINE
lig 9
BU3
B
902 6(R,R)-2,3-BUTANEDIOL