Analysis of Ligand-Protein Contacts in PDB entry:
1TPZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 6 ligands in PDB entry 1TPZ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
1501 1MAGNESIUM ION
lig 2
GDP
A
1500 28GUANOSINE-5'-DIPHOSPHATE
lig 3
MG
B
2501 1MAGNESIUM ION
lig 4
GDP
B
2500 28GUANOSINE-5'-DIPHOSPHATE
lig 5
EDO
B
2000 41,2-ETHANEDIOL
lig 6
MPD
B
1000 8(4S)-2-METHYL-2,4-PENTANEDIOL