Analysis of Ligand-Protein Contacts in PDB entry:
1V3D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 1V3D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
3081 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
5231 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
CA
A
1001 1CALCIUM ION
lig 8
SO4
A
3002 5SULFATE ION
lig 9
DAN
A
1191 202-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC AC
lig 10
NAG
B
3081 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
B
5231 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
CA
B
2001 1CALCIUM ION
lig 13
SO4
B
3001 5SULFATE ION
lig 14
DAN
B
2191 202-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC AC