Analysis of Ligand-Protein Contacts in PDB entry:
1VBO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 1VBO. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
AYA
A
1 8N-ACETYLALANINE
lig 2
AYA
B
1 8N-ACETYLALANINE
lig 3
AYA
C
1 8N-ACETYLALANINE
lig 4
AYA
D
1 8N-ACETYLALANINE
lig 5
AYA
E
1 8N-ACETYLALANINE
lig 6
AYA
F
1 8N-ACETYLALANINE
lig 7
AYA
G
1 8N-ACETYLALANINE
lig 8
AYA
H
1 8N-ACETYLALANINE
lig 9
MAN
I
1 12ALPHA-D-MANNOPYRANOSE
lig 10
MAN
I
2 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
I
3 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
J
1 12ALPHA-D-MANNOPYRANOSE
lig 13
MAN
J
2 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
J
3 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
K
1 12ALPHA-D-MANNOPYRANOSE
lig 16
MAN
K
2 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
K
3 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
L
1 12ALPHA-D-MANNOPYRANOSE
lig 19
MAN
L
2 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
L
3 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
M
1 12ALPHA-D-MANNOPYRANOSE
lig 22
MAN
M
2 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
M
3 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
N
1 12ALPHA-D-MANNOPYRANOSE
lig 25
MAN
N
2 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
N
3 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
D
1405 12ALPHA-D-MANNOPYRANOSE
lig 28
MAN
F
2405 12ALPHA-D-MANNOPYRANOSE