Analysis of Ligand-Protein Contacts in PDB entry:
1VF5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 1VF5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HEM
A
301 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
HEM
A
302 43PROTOPORPHYRIN IX CONTAINING FE
lig 3
HEM
A
303 43PROTOPORPHYRIN IX CONTAINING FE
lig 4
TDS
A
304 30 4-ONE
lig 5
PL9
A
305 55 BENZOQUINONE
lig 6
OPC
B
307 54 EN-1-AMINIUM 4-OXIDE
lig 7
CLA
B
201 65CHLOROPHYLL A
lig 8
HEM
C
301 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
OPC
D
306 54 EN-1-AMINIUM 4-OXIDE
lig 10
FES
D
200 4FE2/S2 (INORGANIC) CLUSTER
lig 11
BCR
E
101 40BETA-CAROTENE
lig 12
HEM
N
301 43PROTOPORPHYRIN IX CONTAINING FE
lig 13
HEM
N
302 43PROTOPORPHYRIN IX CONTAINING FE
lig 14
HEM
N
303 43PROTOPORPHYRIN IX CONTAINING FE
lig 15
TDS
N
1304 30 4-ONE
lig 16
OPC
N
1306 54 EN-1-AMINIUM 4-OXIDE
lig 17
CLA
O
1201 65CHLOROPHYLL A
lig 18
HEM
P
301 43PROTOPORPHYRIN IX CONTAINING FE
lig 19
PL9
Q
1305 55 BENZOQUINONE
lig 20
OPC
Q
1307 54 EN-1-AMINIUM 4-OXIDE
lig 21
FES
Q
1200 4FE2/S2 (INORGANIC) CLUSTER
lig 22
BCR
R
1101 40BETA-CAROTENE