Analysis of Ligand-Protein Contacts in PDB entry:
1VRP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 6 ligands in PDB entry 1VRP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
404 1MAGNESIUM ION
lig 2
ADP
A
400 27ADENOSINE-5'-DIPHOSPHATE
lig 3
MG
B
403 1MAGNESIUM ION
lig 4
NO3
B
405 4NITRATE ION
lig 5
ADP
B
401 27ADENOSINE-5'-DIPHOSPHATE
lig 6
IOM
B
402 9(DIAMINOMETHYL-METHYL-AMINO)-ACETIC ACID