Analysis of Ligand-Protein Contacts in PDB entry:
1WW4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1WW4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
E
1 12BETA-D-GLUCOPYRANOSE
lig 2
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 3
SIA
E
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 4
GLC
F
1 12ALPHA-D-GLUCOPYRANOSE
lig 5
GLA
F
2 11ALPHA-D-GALACTOPYRANOSE
lig 6
SIA
F
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 7
BGC
G
1 12BETA-D-GLUCOPYRANOSE
lig 8
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 9
SIA
G
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
BGC
H
1 12BETA-D-GLUCOPYRANOSE
lig 11
GAL
H
2 11BETA-D-GALACTOPYRANOSE
lig 12
SIA
H
3 20N-ACETYL-ALPHA-NEURAMINIC ACID