Analysis of Ligand-Protein Contacts in PDB entry:
1Y7B


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 1Y7B. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CA
A
3001 1CALCIUM ION
lig 2
SO4
A
3027 5SULFATE ION
lig 3
SO4
A
3029 5SULFATE ION
lig 4
EPE
A
3006 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 5
PGE
A
3023 10TRIETHYLENE GLYCOL
lig 6
GOL
A
3011 6GLYCEROL
lig 7
GOL
A
3012 6GLYCEROL
lig 8
GOL
A
3017 6GLYCEROL
lig 9
GOL
A
3022 6GLYCEROL
lig 10
CA
B
3002 1CALCIUM ION
lig 11
SO4
B
3025 5SULFATE ION
lig 12
SO4
B
3026 5SULFATE ION
lig 13
EPE
B
3005 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 14
GOL
B
3009 6GLYCEROL
lig 15
GOL
B
3010 6GLYCEROL
lig 16
GOL
B
3018 6GLYCEROL
lig 17
GOL
B
3021 6GLYCEROL
lig 18
CA
C
3003 1CALCIUM ION
lig 19
EPE
C
3008 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 20
GOL
C
3013 6GLYCEROL
lig 21
GOL
C
3014 6GLYCEROL
lig 22
GOL
C
3020 6GLYCEROL
lig 23
CA
D
3004 1CALCIUM ION
lig 24
SO4
D
3024 5SULFATE ION
lig 25
SO4
D
3028 5SULFATE ION
lig 26
EPE
D
3007 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 27
GOL
D
3015 6GLYCEROL
lig 28
GOL
D
3016 6GLYCEROL
lig 29
GOL
D
3019 6GLYCEROL