Analysis of Ligand-Protein Contacts in PDB entry:
1Y9D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 1Y9D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
2601 1MAGNESIUM ION
lig 2
NA
A
2605 1SODIUM ION
lig 3
SO4
A
2804 5SULFATE ION
lig 4
TPP
A
2602 26THIAMINE DIPHOSPHATE
lig 5
FAD
A
2603 27FLAVIN-ADENINE DINUCLEOTIDE
lig 6
MG
B
2701 1MAGNESIUM ION
lig 7
NA
B
2705 1SODIUM ION
lig 8
SO4
B
2904 5SULFATE ION
lig 9
TPP
B
2702 26THIAMINE DIPHOSPHATE
lig 10
FAD
B
2703 27FLAVIN-ADENINE DINUCLEOTIDE
lig 11
SO4
C
2604 5SULFATE ION
lig 12
MG
C
2801 1MAGNESIUM ION
lig 13
TPP
C
2802 26THIAMINE DIPHOSPHATE
lig 14
FAD
C
2803 27FLAVIN-ADENINE DINUCLEOTIDE
lig 15
SO4
D
2704 5SULFATE ION
lig 16
MG
D
2901 1MAGNESIUM ION
lig 17
TPP
D
2902 26THIAMINE DIPHOSPHATE
lig 18
FAD
D
2903 27FLAVIN-ADENINE DINUCLEOTIDE