Analysis of Ligand-Protein Contacts in PDB entry:
1YAH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 1YAH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
1179 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
SIA
A
1180 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 3
SIA
A
1181 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 4
SO4
A
1182 5SULFATE ION
lig 5
SO4
A
1183 5SULFATE ION
lig 6
EEE
A
1 6ETHYL ACETATE
lig 7
EEE
A
11 6ETHYL ACETATE
lig 8
NAG
B
1279 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
SIA
B
1280 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
SO4
B
1281 5SULFATE ION
lig 11
EEE
B
2 6ETHYL ACETATE
lig 12
EEE
B
1282 6ETHYL ACETATE
lig 13
NAG
C
1379 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
SO4
C
1380 5SULFATE ION
lig 15
SO4
C
1381 5SULFATE ION
lig 16
SO4
C
1382 5SULFATE ION
lig 17
EEE
C
3 6ETHYL ACETATE
lig 18
EEE
C
1383 6ETHYL ACETATE