Analysis of Ligand-Protein Contacts in PDB entry:
1YC2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 1YC2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ZN
A
401 1ZINC ION
lig 2
ZN
A
402 1ZINC ION
lig 3
SO4
A
605 5SULFATE ION
lig 4
SO4
A
607 5SULFATE ION
lig 5
NAD
A
503 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 6
NCA
A
506 9NICOTINAMIDE
lig 7
EDO
A
704 41,2-ETHANEDIOL
lig 8
EDO
A
705 41,2-ETHANEDIOL
lig 9
EDO
A
706 41,2-ETHANEDIOL
lig 10
ZN
B
403 1ZINC ION
lig 11
ZN
B
404 1ZINC ION
lig 12
SO4
B
602 5SULFATE ION
lig 13
SO4
B
604 5SULFATE ION
lig 14
SO4
B
609 5SULFATE ION
lig 15
SO4
B
610 5SULFATE ION
lig 16
NAD
B
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 17
NCA
B
508 9NICOTINAMIDE
lig 18
2PE
B
701 28NONAETHYLENE GLYCOL
lig 19
EDO
B
707 41,2-ETHANEDIOL
lig 20
EDO
B
708 41,2-ETHANEDIOL
lig 21
ZN
C
405 1ZINC ION
lig 22
ZN
C
406 1ZINC ION
lig 23
SO4
C
601 5SULFATE ION
lig 24
SO4
C
606 5SULFATE ION
lig 25
SO4
C
612 5SULFATE ION
lig 26
NAD
C
502 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 27
2PE
C
702 28NONAETHYLENE GLYCOL
lig 28
ZN
D
407 1ZINC ION
lig 29
ZN
D
408 1ZINC ION
lig 30
SO4
D
603 5SULFATE ION
lig 31
NAD
D
505 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 32
NCA
D
510 9NICOTINAMIDE
lig 33
PG4
D
703 13TETRAETHYLENE GLYCOL
lig 34
PGE
D
709 10TRIETHYLENE GLYCOL
lig 35
ZN
E
409 1ZINC ION
lig 36
APR
E
504 36ADENOSINE-5-DIPHOSPHORIBOSE
lig 37
NCA
E
507 9NICOTINAMIDE
lig 38
NCA
E
509 9NICOTINAMIDE