Analysis of Ligand-Protein Contacts in PDB entry:
1YHM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 1YHM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
401 1MAGNESIUM ION
lig 2
MG
A
402 1MAGNESIUM ION
lig 3
MG
A
403 1MAGNESIUM ION
lig 4
SO4
A
370 5SULFATE ION
lig 5
AHD
A
901 144-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHON
lig 6
IPE
A
900 143-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE
lig 7
SO4
B
1370 5SULFATE ION
lig 8
MG
B
1401 1MAGNESIUM ION
lig 9
MG
B
1402 1MAGNESIUM ION
lig 10
MG
B
1403 1MAGNESIUM ION
lig 11
AHD
B
1901 144-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHON
lig 12
IPE
B
1900 143-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE
lig 13
SO4
C
2370 5SULFATE ION
lig 14
MG
C
2401 1MAGNESIUM ION
lig 15
MG
C
2402 1MAGNESIUM ION
lig 16
MG
C
2403 1MAGNESIUM ION
lig 17
AHD
C
2901 144-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHON
lig 18
IPE
C
2900 143-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE