Analysis of Ligand-Protein Contacts in PDB entry:
1YIQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 6 ligands in PDB entry 1YIQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CA
A
802 1CALCIUM ION
lig 2
PQQ
A
801 24PYRROLOQUINOLINE QUINONE
lig 3
HEC
A
901 43HEME C
lig 4
PGR
A
803 5R-1,2-PROPANEDIOL
lig 5
PGR
A
804 5R-1,2-PROPANEDIOL
lig 6
PGR
A
805 5R-1,2-PROPANEDIOL