Analysis of Ligand-Protein Contacts in PDB entry:
1YYG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1YYG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
A
364 11ALPHA-D-MANNOPYRANOSE
lig 4
CA
A
371 1CALCIUM ION
lig 5
CA
A
372 1CALCIUM ION
lig 6
CA
A
381 1CALCIUM ION
lig 7
NA
A
382 1SODIUM ION
lig 8
HEM
A
396 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
GOL
A
401 6GLYCEROL
lig 10
GOL
A
404 6GLYCEROL
lig 11
GOL
A
406 6GLYCEROL