Analysis of Ligand-Protein Contacts in PDB entry:
1B23


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 1B23. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
4SU
R
8 204-THIOURIDINE-5'-MONOPHOSPHATE
lig 2
H2U
R
20 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 3
H2U
R
21 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 4
PSU
R
32 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 5
MIA
R
37 292-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-M
lig 6
PSU
R
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 7
5MU
R
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 8
PSU
R
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 9
MG
R
77 1MAGNESIUM ION
lig 10
MG
R
179 1MAGNESIUM ION
lig 11
CYS
R
976 6CYSTEINE
lig 12
MG
P
407 1MAGNESIUM ION
lig 13
SO4
P
408 5SULFATE ION
lig 14
SO4
P
409 5SULFATE ION
lig 15
GNP
P
406 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE