Analysis of Ligand-Protein Contacts in PDB entry:
1BRR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 1BRR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
C
1 5PYROGLUTAMIC ACID
lig 2
GLC
D
1 12ALPHA-D-GLUCOPYRANOSE
lig 3
MAN
D
2 11ALPHA-D-MANNOPYRANOSE
lig 4
SGA
D
3 153-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 5
GLC
E
1 12ALPHA-D-GLUCOPYRANOSE
lig 6
MAN
E
2 11ALPHA-D-MANNOPYRANOSE
lig 7
SGA
E
3 153-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 8
RET
A
999 20RETINAL
lig 9
ARC
A
1000 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 10
ARC
A
1001 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 11
ARC
A
1002 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 12
GOL
A
1003 3GLYCEROL
lig 13
BGC
B
251 12BETA-D-GLUCOPYRANOSE
lig 14
RET
B
999 20RETINAL
lig 15
ARC
B
1000 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 16
ARC
B
1001 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 17
ARC
B
1002 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 18
ARC
B
1003 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 19
OCT
B
1004 8N-OCTANE
lig 20
GOL
B
1005 4GLYCEROL
lig 21
RET
C
999 20RETINAL
lig 22
ARC
C
1000 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 23
ARC
C
1001 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 24
ARC
C
1002 213,7,11,15-TETRAMETHYL-HEXADECAN-1-OL
lig 25
GOL
C
1003 3GLYCEROL