Analysis of Ligand-Protein Contacts in PDB entry:
1DMJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 1DMJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACT
A
1850 4ACETATE ION
lig 2
ACT
A
1860 4ACETATE ION
lig 3
CAC
A
950 3CACODYLATE ION
lig 4
ZN
A
900 1ZINC ION
lig 5
HEM
A
1500 43PROTOPORPHYRIN IX CONTAINING FE
lig 6
AP4
A
1650 16 CYCLOPENTA[A]NAPHTHALENE-1,9-DIONE
lig 7
ITU
A
1800 6ETHYLISOTHIOUREA
lig 8
GOL
A
1880 6GLYCEROL
lig 9
ACT
B
2850 4ACETATE ION
lig 10
ACT
B
2860 4ACETATE ION
lig 11
CAC
B
950 3CACODYLATE ION
lig 12
HEM
B
2500 43PROTOPORPHYRIN IX CONTAINING FE
lig 13
AP4
B
2650 16 CYCLOPENTA[A]NAPHTHALENE-1,9-DIONE
lig 14
ITU
B
2800 6ETHYLISOTHIOUREA
lig 15
GOL
B
2880 6GLYCEROL