Analysis of Ligand-Protein Contacts in PDB entry:
1DNU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 35 ligands in PDB entry 1DNU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CSO
C
150 7S-HYDROXYCYSTEINE
lig 2
CSO
D
150 7S-HYDROXYCYSTEINE
lig 3
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 8
FUC
E
6 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 14
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 15
SCN
A
201 3THIOCYANATE ION
lig 16
SO4
A
202 5SULFATE ION
lig 17
SCN
A
203 3THIOCYANATE ION
lig 18
NAG
C
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
C
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
CA
C
603 1CALCIUM ION
lig 21
SO4
C
604 5SULFATE ION
lig 22
HEM
C
605 43PROTOPORPHYRIN IX CONTAINING FE
lig 23
ACY
C
606 4ACETIC ACID
lig 24
ACY
C
607 4ACETIC ACID
lig 25
ACY
C
608 4ACETIC ACID
lig 26
SCN
B
201 3THIOCYANATE ION
lig 27
SCN
B
202 3THIOCYANATE ION
lig 28
HEM
D
601 43PROTOPORPHYRIN IX CONTAINING FE
lig 29
NAG
D
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
D
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
CA
D
604 1CALCIUM ION
lig 32
SO4
D
605 5SULFATE ION
lig 33
ACY
D
606 4ACETIC ACID
lig 34
ACY
D
607 4ACETIC ACID
lig 35
ACY
D
608 4ACETIC ACID