Analysis of Ligand-Protein Contacts in PDB entry:
1DPJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 1DPJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
BMA
C
6 11BETA-D-MANNOPYRANOSE
lig 7
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
C
8 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
C
9 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
A
800 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
SO4
A
801 5SULFATE ION
lig 12
SO4
A
803 5SULFATE ION
lig 13
SO4
B
802 5SULFATE ION
lig 14
SO4
B
804 5SULFATE ION