Analysis of Ligand-Protein Contacts in PDB entry:
1E4M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 1E4M. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 6
XYP
B
4 9BETA-D-XYLOPYRANOSE
lig 7
FUC
B
5 10ALPHA-L-FUCOPYRANOSE
lig 8
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 11
XYP
C
4 9BETA-D-XYLOPYRANOSE
lig 12
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 14
FUC
C
7 10ALPHA-L-FUCOPYRANOSE
lig 15
NAG
M
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
M
911 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
M
931 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
M
961 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
M
971 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
M
991 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
ZN
M
1502 1ZINC ION
lig 22
SO4
M
1503 5SULFATE ION
lig 23
SO4
M
1504 5SULFATE ION
lig 24
SO4
M
1505 5SULFATE ION
lig 25
SO4
M
1506 5SULFATE ION
lig 26
SO4
M
1507 5SULFATE ION
lig 27
SO4
M
1508 5SULFATE ION
lig 28
SO4
M
1509 5SULFATE ION
lig 29
SO4
M
1510 5SULFATE ION
lig 30
GOL
M
1511 6GLYCEROL
lig 31
GOL
M
1512 6GLYCEROL
lig 32
GOL
M
1513 6GLYCEROL
lig 33
GOL
M
1514 6GLYCEROL
lig 34
GOL
M
1515 6GLYCEROL