Analysis of Ligand-Protein Contacts in PDB entry:
1EFR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 1EFR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ACE
Q
0 3ACETYL GROUP
lig 2
YCP
Q
1 8(2S)-PIPERIDINE-2-CARBOXYLIC ACID
lig 3
AIB
Q
2 6ALPHA-AMINOISOBUTYRIC ACID
lig 4
YCP
Q
3 8(2S)-PIPERIDINE-2-CARBOXYLIC ACID
lig 5
AIB
Q
4 6ALPHA-AMINOISOBUTYRIC ACID
lig 6
AIB
Q
5 6ALPHA-AMINOISOBUTYRIC ACID
lig 7
BAL
Q
7 5BETA-ALANINE
lig 8
AIB
Q
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 9
AIB
Q
10 6ALPHA-AMINOISOBUTYRIC ACID
lig 10
YCP
Q
11 8(2S)-PIPERIDINE-2-CARBOXYLIC ACID
lig 11
AIB
Q
12 6ALPHA-AMINOISOBUTYRIC ACID
lig 12
AIB
Q
15 6ALPHA-AMINOISOBUTYRIC ACID
lig 13
TLX
Q
16 16 PYRIMIDINE
lig 14
MG
A
601 1MAGNESIUM ION
lig 15
ANP
A
600 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 16
MG
B
601 1MAGNESIUM ION
lig 17
ANP
B
600 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 18
MG
C
601 1MAGNESIUM ION
lig 19
ANP
C
600 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 20
MG
D
601 1MAGNESIUM ION
lig 21
ADP
D
600 27ADENOSINE-5'-DIPHOSPHATE
lig 22
MG
F
601 1MAGNESIUM ION
lig 23
ANP
F
600 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE