Analysis of Ligand-Protein Contacts in PDB entry:
1FCW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 70 ligands in PDB entry 1FCW. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
2MG
A
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 2
H2U
A
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 3
H2U
A
17 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 4
M2G
A
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 5
OMC
A
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 6
OMG
A
34 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 7
YG
A
37 39WYBUTOSINE
lig 8
PSU
A
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 9
5MC
A
40 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 10
7MG
A
46 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 11
5MC
A
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 12
5MU
A
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 13
PSU
A
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 14
1MA
A
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 15
2MG
B
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 16
H2U
B
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 17
H2U
B
17 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 18
M2G
B
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 19
OMC
B
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 20
OMG
B
34 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 21
YG
B
37 39WYBUTOSINE
lig 22
PSU
B
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 23
5MC
B
40 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 24
7MG
B
46 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 25
5MC
B
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 26
5MU
B
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 27
PSU
B
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 28
1MA
B
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 29
2MG
C
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 30
H2U
C
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 31
H2U
C
17 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 32
M2G
C
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 33
OMC
C
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 34
OMG
C
34 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 35
YG
C
37 39WYBUTOSINE
lig 36
PSU
C
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 37
5MC
C
40 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 38
7MG
C
46 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 39
5MC
C
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 40
5MU
C
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 41
PSU
C
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 42
1MA
C
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 43
2MG
D
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 44
H2U
D
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 45
H2U
D
17 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 46
M2G
D
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 47
OMC
D
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 48
OMG
D
34 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 49
YG
D
37 39WYBUTOSINE
lig 50
PSU
D
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 51
5MC
D
40 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 52
7MG
D
46 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 53
5MC
D
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 54
5MU
D
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 55
PSU
D
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 56
1MA
D
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 57
2MG
E
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 58
H2U
E
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 59
H2U
E
17 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 60
M2G
E
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 61
OMC
E
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 62
OMG
E
34 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 63
YG
E
37 39WYBUTOSINE
lig 64
PSU
E
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 65
5MC
E
40 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 66
7MG
E
46 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 67
5MC
E
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 68
5MU
E
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 69
PSU
E
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 70
1MA
E
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE