Analysis of Ligand-Protein Contacts in PDB entry:
1GDE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 4 ligands in PDB entry 1GDE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GLU
A
414 10GLUTAMIC ACID
lig 2
GLU
A
914 10GLUTAMIC ACID
lig 3
PLP
A
413 15PYRIDOXAL-5'-PHOSPHATE
lig 4
PLP
B
913 15PYRIDOXAL-5'-PHOSPHATE