Analysis of Ligand-Protein Contacts in PDB entry:
1GK8

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 65 ligands in PDB entry 1GK8. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	HYP	A	104	8	4-HYDROXYPROLINE
lig 2	HYP	A	151	8	4-HYDROXYPROLINE
lig 3	KCX	A	201	12	LYSINE NZ-CARBOXYLIC ACID
lig 4	SMC	A	256	7	S-METHYLCYSTEINE
lig 5	SMC	A	369	7	S-METHYLCYSTEINE
lig 6	HYP	C	104	8	4-HYDROXYPROLINE
lig 7	HYP	C	151	8	4-HYDROXYPROLINE
lig 8	KCX	C	201	12	LYSINE NZ-CARBOXYLIC ACID
lig 9	SMC	C	256	7	S-METHYLCYSTEINE
lig 10	SMC	C	369	7	S-METHYLCYSTEINE
lig 11	HYP	E	104	8	4-HYDROXYPROLINE
lig 12	HYP	E	151	8	4-HYDROXYPROLINE
lig 13	KCX	E	201	12	LYSINE NZ-CARBOXYLIC ACID
lig 14	SMC	E	256	7	S-METHYLCYSTEINE
lig 15	SMC	E	369	7	S-METHYLCYSTEINE
lig 16	HYP	G	104	8	4-HYDROXYPROLINE
lig 17	HYP	G	151	8	4-HYDROXYPROLINE
lig 18	KCX	G	201	12	LYSINE NZ-CARBOXYLIC ACID
lig 19	SMC	G	256	7	S-METHYLCYSTEINE
lig 20	SMC	G	369	7	S-METHYLCYSTEINE
lig 21	MME	I	1	9	N-METHYL METHIONINE
lig 22	MME	K	1	9	N-METHYL METHIONINE
lig 23	MME	M	1	9	N-METHYL METHIONINE
lig 24	MME	O	1	9	N-METHYL METHIONINE
lig 25	MG	A	1476	1	MAGNESIUM ION
lig 26	CAP	A	1477	21	2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 27	EDO	A	1478	4	1,2-ETHANEDIOL
lig 28	EDO	A	1479	4	1,2-ETHANEDIOL
lig 29	EDO	A	1480	4	1,2-ETHANEDIOL
lig 30	EDO	A	1481	4	1,2-ETHANEDIOL
lig 31	EDO	A	1482	4	1,2-ETHANEDIOL
lig 32	EDO	A	1483	4	1,2-ETHANEDIOL
lig 33	EDO	A	1484	4	1,2-ETHANEDIOL
lig 34	MG	C	1476	1	MAGNESIUM ION
lig 35	CAP	C	1477	21	2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 36	EDO	C	1478	4	1,2-ETHANEDIOL
lig 37	EDO	C	1479	4	1,2-ETHANEDIOL
lig 38	EDO	C	1480	4	1,2-ETHANEDIOL
lig 39	EDO	C	1481	4	1,2-ETHANEDIOL
lig 40	EDO	C	1482	4	1,2-ETHANEDIOL
lig 41	MG	E	1476	1	MAGNESIUM ION
lig 42	CAP	E	1477	21	2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 43	EDO	E	1478	4	1,2-ETHANEDIOL
lig 44	EDO	E	1479	4	1,2-ETHANEDIOL
lig 45	EDO	E	1480	4	1,2-ETHANEDIOL
lig 46	EDO	E	1481	4	1,2-ETHANEDIOL
lig 47	EDO	E	1482	4	1,2-ETHANEDIOL
lig 48	EDO	E	1483	4	1,2-ETHANEDIOL
lig 49	EDO	E	1484	4	1,2-ETHANEDIOL
lig 50	MG	G	1476	1	MAGNESIUM ION
lig 51	CAP	G	1477	21	2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 52	EDO	G	1478	4	1,2-ETHANEDIOL
lig 53	EDO	G	1479	4	1,2-ETHANEDIOL
lig 54	EDO	G	1480	4	1,2-ETHANEDIOL
lig 55	EDO	G	1481	4	1,2-ETHANEDIOL
lig 56	EDO	G	1482	4	1,2-ETHANEDIOL
lig 57	EDO	G	1483	4	1,2-ETHANEDIOL
lig 58	EDO	I	1127	4	1,2-ETHANEDIOL
lig 59	EDO	I	1128	4	1,2-ETHANEDIOL
lig 60	EDO	K	1127	4	1,2-ETHANEDIOL
lig 61	EDO	K	1128	4	1,2-ETHANEDIOL
lig 62	EDO	M	1127	4	1,2-ETHANEDIOL
lig 63	EDO	M	1128	4	1,2-ETHANEDIOL
lig 64	EDO	O	1127	4	1,2-ETHANEDIOL
lig 65	EDO	O	1128	4	1,2-ETHANEDIOL

Analysis of Ligand-Protein Contacts in PDB entry: 1GK8

Analysis of Ligand-Protein Contacts in PDB entry:
1GK8