Analysis of Ligand-Protein Contacts in PDB entry:
1GPM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 1GPM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PO4
A
528 5PHOSPHATE ION
lig 2
POP
A
526 9PYROPHOSPHATE 2-
lig 3
AMP
A
527 23ADENOSINE MONOPHOSPHATE
lig 4
CIT
A
529 13CITRIC ACID
lig 5
PO4
B
528 5PHOSPHATE ION
lig 6
MG
B
530 1MAGNESIUM ION
lig 7
POP
B
526 9PYROPHOSPHATE 2-
lig 8
AMP
B
527 23ADENOSINE MONOPHOSPHATE
lig 9
CIT
B
529 13CITRIC ACID
lig 10
PO4
C
528 5PHOSPHATE ION
lig 11
MG
C
530 1MAGNESIUM ION
lig 12
POP
C
526 9PYROPHOSPHATE 2-
lig 13
AMP
C
527 23ADENOSINE MONOPHOSPHATE
lig 14
CIT
C
529 13CITRIC ACID
lig 15
PO4
D
528 5PHOSPHATE ION
lig 16
MG
D
530 1MAGNESIUM ION
lig 17
POP
D
526 9PYROPHOSPHATE 2-
lig 18
AMP
D
527 23ADENOSINE MONOPHOSPHATE
lig 19
CIT
D
529 13CITRIC ACID