Analysis of Ligand-Protein Contacts in PDB entry:
1GQH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 1GQH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
E
3 11ALPHA-D-MANNOPYRANOSE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
MAN
F
3 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
MAN
G
3 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
KOJ
A
1351 105-HYDROXY-2-(HYDROXYMETHYL)-4H-PYRAN-4-ONE
lig 15
CU
A
1352 1COPPER (II) ION
lig 16
NAG
A
1353 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
1356 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
A
1357 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
A
1358 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
KOJ
B
1351 105-HYDROXY-2-(HYDROXYMETHYL)-4H-PYRAN-4-ONE
lig 21
CU
B
1352 1COPPER (II) ION
lig 22
NAG
B
1353 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
B
1356 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
B
1357 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
KOJ
C
1351 105-HYDROXY-2-(HYDROXYMETHYL)-4H-PYRAN-4-ONE
lig 26
CU
C
1352 1COPPER (II) ION
lig 27
NAG
C
1354 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
C
1357 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
C
1358 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
KOJ
D
1351 105-HYDROXY-2-(HYDROXYMETHYL)-4H-PYRAN-4-ONE
lig 31
CU
D
1352 1COPPER (II) ION
lig 32
NAG
D
1353 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
D
1356 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE