Analysis of Ligand-Protein Contacts in PDB entry:
1GQJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 1GQJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
XYP
C
1 10BETA-D-XYLOPYRANOSE
lig 2
XYP
C
2 9BETA-D-XYLOPYRANOSE
lig 3
XYP
D
1 10BETA-D-XYLOPYRANOSE
lig 4
XYP
D
2 9BETA-D-XYLOPYRANOSE
lig 5
EDO
A
1713 41,2-ETHANEDIOL
lig 6
EDO
A
1714 41,2-ETHANEDIOL
lig 7
EDO
A
1715 41,2-ETHANEDIOL
lig 8
EDO
A
1716 41,2-ETHANEDIOL
lig 9
EDO
A
1717 41,2-ETHANEDIOL
lig 10
EDO
A
1718 41,2-ETHANEDIOL
lig 11
CO
A
1721 1COBALT (II) ION
lig 12
CO
A
1722 1COBALT (II) ION
lig 13
CO
A
1723 1COBALT (II) ION
lig 14
CO
A
1724 1COBALT (II) ION
lig 15
EDO
B
1713 41,2-ETHANEDIOL
lig 16
EDO
B
1714 41,2-ETHANEDIOL
lig 17
EDO
B
1715 41,2-ETHANEDIOL
lig 18
EDO
B
1716 41,2-ETHANEDIOL
lig 19
EDO
B
1717 41,2-ETHANEDIOL
lig 20
EDO
B
1718 41,2-ETHANEDIOL
lig 21
CO
B
1721 1COBALT (II) ION
lig 22
CO
B
1722 1COBALT (II) ION
lig 23
CO
B
1723 1COBALT (II) ION
lig 24
CO
B
1724 1COBALT (II) ION