Analysis of Ligand-Protein Contacts in PDB entry:
1GSL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1GSL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
A
1 5PYROGLUTAMIC ACID
lig 2
MAG
B
1 16METHYL 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYR
lig 3
GAL
B
2 11BETA-D-GALACTOPYRANOSE
lig 4
FUC
B
3 10ALPHA-L-FUCOPYRANOSE
lig 5
FUC
B
4 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 9
FUC
C
4 10ALPHA-L-FUCOPYRANOSE
lig 10
MN
A
250 1MANGANESE (II) ION
lig 11
CA
A
251 1CALCIUM ION