Analysis of Ligand-Protein Contacts in PDB entry:
1GY3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 10 ligands in PDB entry 1GY3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
160 11PHOSPHOTHREONINE
lig 2
TPO
C
160 10PHOSPHOTHREONINE
lig 3
ATP
A
1297 27ADENOSINE-5'-TRIPHOSPHATE
lig 4
MG
A
1298 1MAGNESIUM ION
lig 5
NO3
A
1299 4NITRATE ION
lig 6
GOL
B
1433 6GLYCEROL
lig 7
GOL
C
1297 6GLYCEROL
lig 8
ATP
C
1298 27ADENOSINE-5'-TRIPHOSPHATE
lig 9
MG
C
1299 1MAGNESIUM ION
lig 10
NO3
C
1300 4NITRATE ION