Analysis of Ligand-Protein Contacts in PDB entry:
1GZM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 1GZM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ACE
A
0 3ACETYL GROUP
lig 2
ACE
B
0 3ACETYL GROUP
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 6
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 12
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 15
RET
A
1332 20RETINAL
lig 16
PLM
A
1333 17PALMITIC ACID
lig 17
PLM
A
1334 17PALMITIC ACID
lig 18
PEF
A
1341 20DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 19
LDA
A
1342 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 20
C8E
A
1343 17(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 21
C8E
A
1344 15(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 22
C8E
A
1345 10(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 23
C8E
A
1346 18(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 24
C8E
A
1347 21(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 25
C8E
A
1348 12(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 26
ZN
A
1349 1ZINC ION
lig 27
RET
B
1332 20RETINAL
lig 28
PLM
B
1333 17PALMITIC ACID
lig 29
PLM
B
1334 17PALMITIC ACID
lig 30
C8E
B
1340 21(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 31
C8E
B
1341 12(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 32
PEF
B
1342 24DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 33
LDA
B
1343 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 34
C8E
B
1344 14(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 35
C8E
B
1345 14(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 36
C8E
B
1346 10(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 37
C8E
B
1347 18(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 38
LDA
B
1348 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 39
ZN
B
1349 1ZINC ION