Analysis of Ligand-Protein Contacts in PDB entry:
1IJD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 1IJD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
FME
C
1 10N-FORMYLMETHIONINE
lig 3
FME
E
1 10N-FORMYLMETHIONINE
lig 4
BCL
A
54 66BACTERIOCHLOROPHYLL A
lig 5
BCL
A
55 66BACTERIOCHLOROPHYLL A
lig 6
RPA
B
43 53RHODOPINAL GLUCOSIDE
lig 7
BOG
B
44 9OCTYL BETA-D-GLUCOPYRANOSIDE
lig 8
BCL
B
45 66BACTERIOCHLOROPHYLL A
lig 9
BCL
C
54 66BACTERIOCHLOROPHYLL A
lig 10
BCL
C
55 66BACTERIOCHLOROPHYLL A
lig 11
RPA
D
43 53RHODOPINAL GLUCOSIDE
lig 12
BOG
D
44 9OCTYL BETA-D-GLUCOPYRANOSIDE
lig 13
BCL
D
45 66BACTERIOCHLOROPHYLL A
lig 14
BCL
E
54 66BACTERIOCHLOROPHYLL A
lig 15
BCL
E
55 66BACTERIOCHLOROPHYLL A
lig 16
RPA
F
43 53RHODOPINAL GLUCOSIDE
lig 17
BOG
F
44 9OCTYL BETA-D-GLUCOPYRANOSIDE
lig 18
BCL
F
45 66BACTERIOCHLOROPHYLL A