Analysis of Ligand-Protein Contacts in PDB entry:
1JDN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 1JDN. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NDG
B
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
BMA
B
5 11BETA-D-MANNOPYRANOSE
lig 6
BMA
B
6 11BETA-D-MANNOPYRANOSE
lig 7
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
MAN
C
3 11ALPHA-D-MANNOPYRANOSE
lig 10
BMA
C
4 11BETA-D-MANNOPYRANOSE
lig 11
FUC
C
5 10ALPHA-L-FUCOPYRANOSE
lig 12
CL
A
451 1CHLORIDE ION
lig 13
CL
A
452 1CHLORIDE ION