Analysis of Ligand-Protein Contacts in PDB entry:
1KDG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 1KDG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
802 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
A
804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
MAN
A
805 11ALPHA-D-MANNOPYRANOSE
lig 5
6FA
A
6801 546-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE
lig 6
EMT
A
6907 102-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 7
NAG
B
803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
B
804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
MAN
B
805 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
B
806 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
B
807 11ALPHA-D-MANNOPYRANOSE
lig 12
6FA
B
7801 546-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE
lig 13
UNX
B
904 1UNKNOWN ATOM OR ION