Analysis of Ligand-Protein Contacts in PDB entry:
1KYA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 56 ligands in PDB entry 1KYA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
506 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
A
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
A
510 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
511 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
512 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
A
513 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
CU
A
500 1COPPER (II) ION
lig 9
CU
A
501 1COPPER (II) ION
lig 10
CU
A
502 1COPPER (II) ION
lig 11
CU
A
503 1COPPER (II) ION
lig 12
PYE
A
508 6TETRAHYDROPYRAN
lig 13
PYE
A
509 6TETRAHYDROPYRAN
lig 14
XYD
A
514 92,5-DIMETHYLANILINE
lig 15
NAG
B
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
B
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
B
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
B
609 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
B
610 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
B
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
B
613 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
CU
B
500 1COPPER (II) ION
lig 23
CU
B
501 1COPPER (II) ION
lig 24
CU
B
502 1COPPER (II) ION
lig 25
CU
B
503 1COPPER (II) ION
lig 26
PYE
B
608 6TETRAHYDROPYRAN
lig 27
PYE
B
614 6TETRAHYDROPYRAN
lig 28
PYE
B
615 6TETRAHYDROPYRAN
lig 29
PYE
B
616 6TETRAHYDROPYRAN
lig 30
XYD
B
612 92,5-DIMETHYLANILINE
lig 31
NAG
C
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
C
706 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
C
707 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
C
708 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
C
709 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
C
710 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
C
711 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
CU
C
500 1COPPER (II) ION
lig 39
CU
C
501 1COPPER (II) ION
lig 40
CU
C
502 1COPPER (II) ION
lig 41
CU
C
503 1COPPER (II) ION
lig 42
XYD
C
712 92,5-DIMETHYLANILINE
lig 43
NAG
D
805 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
D
806 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
D
807 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
D
811 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
D
812 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
D
813 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
CU
D
500 1COPPER (II) ION
lig 50
CU
D
501 1COPPER (II) ION
lig 51
CU
D
502 1COPPER (II) ION
lig 52
CU
D
503 1COPPER (II) ION
lig 53
PYE
D
808 6TETRAHYDROPYRAN
lig 54
PYE
D
809 6TETRAHYDROPYRAN
lig 55
PYE
D
810 6TETRAHYDROPYRAN
lig 56
XYD
D
814 92,5-DIMETHYLANILINE