Analysis of Ligand-Protein Contacts in PDB entry:
1LOD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1LOD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CA
A
228 1CALCIUM ION
lig 2
MN
A
229 1MANGANESE (II) ION
lig 3
MUR
A
230 17BETA-MURAMIC ACID
lig 4
CA
C
458 1CALCIUM ION
lig 5
MN
C
459 1MANGANESE (II) ION
lig 6
MUR
C
460 17BETA-MURAMIC ACID
lig 7
CA
E
688 1CALCIUM ION
lig 8
MN
E
689 1MANGANESE (II) ION
lig 9
MUR
E
690 17BETA-MURAMIC ACID
lig 10
CA
G
918 1CALCIUM ION
lig 11
MN
G
919 1MANGANESE (II) ION
lig 12
MUR
G
920 17BETA-MURAMIC ACID