Analysis of Ligand-Protein Contacts in PDB entry:
1LOJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 1LOJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
U
A
9010 21URIDINE-5'-MONOPHOSPHATE
lig 2
MPD
A
7005 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 3
URI
B
9007 17URIDINE
lig 4
MPD
B
7011 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
URI
C
9011 17URIDINE
lig 6
MPD
C
7006 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
U
D
9008 21URIDINE-5'-MONOPHOSPHATE
lig 8
MPD
D
7004 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 9
URI
E
9006 17URIDINE
lig 10
MPD
E
7012 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 11
URI
F
9009 17URIDINE
lig 12
MPD
F
7013 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 13
URI
G
9012 17URIDINE
lig 14
MPD
G
7007 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 15
U
H
9003 21URIDINE-5'-MONOPHOSPHATE
lig 16
MPD
H
7008 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 17
U
I
9002 21URIDINE-5'-MONOPHOSPHATE
lig 18
MPD
I
7014 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 19
URI
J
9001 17URIDINE
lig 20
MPD
J
7001 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 21
U
K
9014 21URIDINE-5'-MONOPHOSPHATE
lig 22
MPD
K
7002 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 23
URI
L
9005 17URIDINE
lig 24
MPD
L
7003 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 25
URI
M
9004 17URIDINE
lig 26
MPD
M
7010 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 27
U5P
N
9013 21URIDINE-5'-MONOPHOSPHATE
lig 28
MPD
N
7009 8(4S)-2-METHYL-2,4-PENTANEDIOL